Publications

Author: Kuniyuki Hatori, Ph. D., Associate Professor, Department of Mechanical Systems Engineering, Graduate School of Science and Engineering
Yamagata University, Japan
e-mail: khatori@yz.yamagata-u.ac.jp
Research fields: Muscle contraction, Motor protein, Cytoskeleton, Fluorescence microscopy, Energy transduction, Reconstitution of biosystems
Keywords: Actomyosin, Protein stabilizer, Active matter, Crowder, Collective motion, in vitro motility assay, Fluctuation, Protein-protein interactions, Cooperativity
Papers
  1. Ishizaka, T., Hatori, K., Direct observation of oriented behavior of actin filaments interacting with desmin intermediate filaments , Biochimica et Biophysica Acta - General Subjects 1867 (2023) 130488. [PMID: 37838354] doi.org/10.1016/j.bbagen.2023.130488
    Acknowledgements: We thank Masashi Sato and Ryota Yamazaki.
  2. Horiuchi, Y., Makabe, K., Laskaratou, D., Hatori, K., Sliwa, M., Mizuno, H., Hotta, J., Cloning and structural basis of fluorescent protein color variants from identical species of sea anemone , Diadumene lineata, Photochemical & Photobiological Sciences (2023) 0123456789. [PMID: 36943649] (Contribution to SDS-PAGE and photobleaching assay)
  3. Sato, M., Ishizaka, T., Hotta, J., Hatori, K., Fluorescence microscopic imaging of single desmin intermediate filaments elongated by the presence of divalent cations in vitro, Biophysical Chemistry 287 (2022) 106839. [PMID: 35667132] doi.org/10.1016/j.bpc.2022.106839
    Acknowledgements: We thank Yoshiya Miyasaka and Keigo Murakami.
  4. Sunada, Y., Hatori, K., Polymer-carrying ability of actin filaments interacting with myosin motors in a biological motility system in vitro, Macromolecular Bioscience (2022) e2100471. [PMID: 35261163] doi.org/10.1002/mabi.202100471
    Acknowledgements: We thank Hiroki Soma and Syogo Kanda.
  5. Murakami, K., Sato, M., Miyasaka, Y., Hatori, K., Selective association of desmin intermediate filaments with a phospholipid layer in droplets, Biochemical and Biophysical Research Communications 555 (2021) 109-114. [PMID: 33813269] doi.org/10.1016/j.bbrc.2021.03.131
  6. Okami, M., Sunada, Y., Hatori, K., Lysozyme-induced suppression of enzymatic and motile activities of actin-myosin: Impact of basic proteins, International Journal of Biological Macromolecules 163 (2020) 1147-1153. [PMID: 32668307] doi.org/10.1016/j.ijbiomac.2020.07.040
    Acknowledgement: We thank Takemoto, Y.
  7. Miyasaka, Y., Murakami, K., Ito, K., Kumaki, J., Makabe, K., Hatori, K., Condensed desmin and actin cytoskeletal communication in lipid droplets, Cytoskeleton (Hoboken) 76(9-10) (2019) 477-490. [PMID: 31626391] doi.org/10.1002/cm.21573: Cover Image, Cytoskeleton Volume 76, Issue 7-8 doi.org/10.1002/cm.21581
    Acknowledgement: We thank Matsuda, A., Matsuyoshi, M, and Nozaki, H.
  8. Ito, K., Seino, M., Miyasaka, Y., Hatori, K., Inorganic polyphosphate hydrolysis catalyzed by skeletal muscular actomyosin complexes is uncoupled with motility, Biochimica et Biophysica Acta - Proteins and Proteomics 1866 (2018) 1224-1231. [PMID: 30291898] doi.org/10.1016/j.bbapap.2018.09.013
  9. Hatori, K., Iwase, T., Agent-based simulation of the collective behavior of actin filaments depending on driving and packing forces, Bulletin of Yamagata University (Engineering) 37 (2018) 1-12. [Yamagata University Academic Repository, PDF]
  10. Horiuchi, Y., Laskaratou, D., Sliwa, M., Ruckebusch, C., Hatori, K., Mizuno, H., Hotta, J., Frame-insensitive expression cloning of fluorescent protein from Scolionema suvaense, International Journal of Molecular Sciences 19 (2018) 371. [PMID: 29373508] (Contribution to SDS-PAGE)
  11. Iwase, T., Sasaki, Y., Hatori, K., Alignment of actin filament streams driven by myosin motors in crowded environments, Biochimica et Biophysica Acta - General Subjects 1861 (2017) 2717-2725. [PMID: 28754385] doi.org/10.1016/j.bbagen.2017.07.016
    Acknowledgement: We thank Miyasaka, Y., Munakata, S., Wada, R.
  12. Hatori, K., Iwase, T., Wada, R., Switching of actin-myosin motors by voltage-induced pH bias in vitro, Archives of Biochemistry and Biophysics 603 (2016) 64-71. [PMID: 27210738] doi.org/10.1016/j.abb.2016.05.012
    Acknowledgement: We thank Abe, T.
  13. Oyama, T., Hatori, K., Translocation of cationic polystyrene microspheres associated with actin filaments on a surface coated with myosin motors, Bulletin of Yamagata University (Engineering) 36 (2016) 1-11. [Yamagata University Academic Repository, PDF]
    Acknowledgement: We thank Iwabuchi, S.
  14. Wada, R., Sato, D., Nakamura, T., Hatori, K., Temperature control of the motility of actin filaments interacting with myosin molecules using an electrically conductive glass in the presence of direct current, Archives of Biochemistry and Biophysics 586 (2015) 51-56. [PMID: 26456400] doi.org/10.1016/j.abb.2015.10.001
  15. Hatori, K., Iwasaki, T., Wada, R., Effect of urea and trimethylamine N-oxide on the binding between actin molecules, Biophysical Chemistry 193-194 (2014) 20-26. [PMID: 25086871] doi.org/10.1016/j.bpc.2014.07.001
    Acknowledgement: We thank Nomura, N., Hosogoe, Y.
  16. Munakata, S., Hatori, K., The excluded volume effect induced by poly(ethylene glycol) modulates the motility of actin filaments interacting with myosin, The FEBS Journal 280 (2013) 5875-5883. [PMID: 24004408] doi.org/10.1111/febs.12513
  17. Kumemoto, R., Yusa, K., Shibayama, T., Hatori, K., Trimethylamine N-oxide suppresses the activity of the actomyosin motor, Biochimica et Biophysica Acta -General subjects- 1820 (2012) 1597-1604. [PMID: 22705940] doi.org/10.1016/j.bbagen.2012.06.006
  18. Iwabuchi, S., Takahashi, T., Hatori, K., Transport of actin-decorated liposomes along myosin molecules in vitro, Biochemical and Biophysical Research Communications 422 (2012) 164-168. [PMID: 22575445] doi.org/10.1016/j.bbrc.2012.04.130
  19. Kumemoto, R., Hosogoe, Y., Nomura, N., Hatori, K., Effects of urea and guanidine hydrochloride on the sliding movement of actin filaments with ATP hydrolysis by myosin molecules, The Journal of Biochemistry 149 (2011) 713-720. [PMID: 21324985] doi.org/10.1093/jb/mvr020
  20. Hatori, K., Matsui, M., Omote, Y., Slowly modulating fluctuations as mesoscopic distortions occurring on an actin filament, BioSystems 96 (2009) 14-18. [PMID: 19059304] doi.org/10.1016/j.biosystems.2008.11.003
  21. Arii, Y., Hatori, K., Relationship between the flexibility and the motility of actin filaments: Effects of pH, Biochemical and Biophysical Research Communications 371 (2008) 772-776. [PMID: 18457659] doi.org/10.1016/j.bbrc.2008.04.135
Books
  1. Hatori, K., Kikuchi, S., Modulation of the sliding movement of myosin-driven actin filaments associated with their distortion: The effect of ATP, ADP, and inorganic phosphate, In: Suzuki, M. (Ed.) The Role of Water in ATP Hydrolysis Energy Transduction by Protein Machinery. (2018) 339-353, Springer doi.org/10.1007/978-981-10-8459-1_20
  2. Matsushita, S., Hatori, K., Insight into force transmission along actin filaments: Sliding movement of actin filaments containing inactive components on myosin molecules, In: Consuls, V. A., Minas, D. J. (Eds.) Actin: Structure, Functions and Disease. (2011) 257-269, Nova publishers [Abstract]
Presentations
  1. Hatori, K., Ishizaka, T., Oriented behavior of single actin filaments interacting with single desmin intermediate filaments, The 61th Annual Meeting of Biophysical Society of Japan, Nagoya, Nov. 14-16 (2023)
  2. Ishizaka, T., Hatori, K., Observation of the interaction between single desmin filaments and single actin filaments in a reconstituted motility system, The 60th Annual Meeting of Biophysical Society of Japan, Hakodate, Sep. 28-30 (2022)
  3. Hatori, K., Murata, R., Mima, K., Response of a moving actin filament to a contact with a lysozyme amyloid fibril, The 60th Annual Meeting of Biophysical Society of Japan, Hakodate, Sep. 28-30 (2022)
  4. Sunada, Y., Hatori, K., Test on in vitro transport capacity of actomyosin using polyethylene glycols, The 59th Annual Meeting of Biophysical Society of Japan, Sendai (On-line), Nov. 25-27 (2021)
  5. Sato, M., Murakami, K., Hatori, K., Visualization of single desmin filaments by fluorescence microscopy in vitro, The 58th Annual Meeting of Biophysical Society of Japan, On-line (2020)
  6. Miyasaka, Y., Murakami, K., Hatori, K., Deformations of droplets containing desmin and actin caused by their assembly, The 57th Annual Meeting of Biophysical Society of Japan, Miyazaki (2019)
  7. Ito, K., Hatori, K., Polymerization of actin molecules in the presence of inorganic polyphosphate, The 57th Annual Meeting of Biophysical Society of Japan, Miyazaki (2019)
  8. Okami, M., Hatori, K., Inhibitory effect of lysozyme on the motility of actomyosin, The 57th Annual Meeting of Biophysical Society of Japan, Miyazaki (2019)
  9. Miyasaka, Y., Ito, K., Hatori, K., Deformation and protrusion of cell-sized droplets containing intermediate filaments of desmin, Annual Meeting of Biophysical Society of Japan, Okayama (2018)
  10. Ito, K., Miyasaka, Y., Hatori, K., Interactions between actin and myosin in the presence of inorganic polyphosphates, Annual Meeting of Biophysical Society of Japan, Okayama (2018)
  11. Hatori, K., Seino, M., Ito, K., Tripolyphosphate hydrolysis by myosin and its effect on the motility of actomyosin, Annual Meeting of Biophysical Society of Japan, Kumamoto (2017)
  12. Iwase, T., Miyasaka, Y., Hatori, K., Alignment of actin-streams driven by myosin motors: Dependence on driving force and packing force, Annual Meeting of Biophysical Society of Japan, Kumamoto (2017)
  13. Iwase, T., Sasaki, Y., Hatori, K., Appearance of ordered structure by collective motion of actin filaments in crowded environments, Annual Meeting of Biophysical Society of Japan, Tsukuba (2016)
  14. Hatori, K., Kokaji, Y., Toyama, T., Effect of co-solvents on photo reduction in thylakoid membranes, Annual Meeting of Biophysical Society of Japan, Tsukuba (2016)
  15. Wakamatsu, S., Hatori, K., Okuno, T., The binding of actin filament on the cell membrane flat sheet, Annual Meeting of Biophysical Society of Japan, Tsukuba (2016)
  16. Hatori, K., Abe, T., Wada, R., A reversible change in the velocity of the motility of actin filaments on a heavy meromyosin-coated surface under an electric field, Annual Meeting of Biophysical Society of Japan, Kanazawa (2015)
  17. Hatori, K., Souma, H., Pegylation of actin affects motile fraction rather than the velocity of actin filaments on myosin, Annual Meeting of Biophysical Society of Japan, Sapporo (2014)
  18. Wada, R., Nakamura, T., Hatori, K., Movement of actomyosin on a conductive base under DC current, Annual Meeting of Biophysical Society of Japan, Sapporo (2014)
  19. Hatori, K., Munakata, S., Effect of polyethylene glycol on the motility of actin and regulated thin filaments on myosin molecules, Annual Meeting of Biophysical Society of Japan, Kyoto (2013)
  20. Kumemoto, R., Hatori, K., Counteractive effect of urea and trimethylamine N-oxide on the activity of the actomyosin motor, Annual Meeting of Biophysical Society of Japan, Nagoya (2012)
  21. Kikuchi, S., Hatori, K., Deformation of moving actin filaments on myosin molecules in the presence of ATP, ADP, and inorganic phosphate, Annual Meeting of Biophysical Society of Japan, Nagoya (2012)
  22. Iwabuchi, S., Hatori, K., Actomyosin-driven liposomes in vitro, Annual Meeting of Biophysical Society of Japan, Himeji (2011)
  23. Kikuchi, S., Hatori, K., Evaluation of submicron distortions of actin filaments during sliding movement on myosin molecule, Annual Meeting of Biophysical Society of Japan, Himeji (2011)
  24. Uematsu, Y., Uyeda, Q.P. T., Hatori, K., Motile activity of actin filaments containing acto-S1dc chimera protein with ATP hydrolysis, Annual Meeting of Biophysical Society of Japan, Sendai (2010)
  25. Kumemoto, R., Hatori, K., Sliding velocity and ATPase activity of actomyosin complex in the presence of urea solute, Annual Meeting of Biophysical Society of Japan, Sendai (2010)
  26. Iwabuchi, S., Hatori, K., Interaction of actin-decorated liposomes with myosin molecules fixed on glass surface, Annual Meeting of Biophysical Society of Japan, Sendai (2010)
  27. Hatori, K., Kimijima, H., Photosensitive inhibition of motility of actin filaments covalently conjugated with Cy3 dyes, Annual Meeting of Biophysical Society of Japan, Tokushima (2009)
  28. Matsuda, A., Hatori, K., Desmin affects the sliding movement of actomyosins, Annual Meeting of Biophysical Society of Japan, Tokushima (2009)
  29. Matsui, M., Hatori, K., Effect of fullerenes on the sliding movement of actomyosin complex, Annual Meeting of Biophysical Society of Japan, Fukuoka (2008)
  30. Matsushita, S., Hatori, K., Implication of arrangement of active components along an actin filament for coordinating the sliding movement, Annual Meeting of Biophysical Society of Japan, Fukuoka (2008)
  31. Hatori, K., Nomura, N., Stabilization of actin filaments in the presence of urea, Annual Meeting of Biophysical Society of Japan, Fukuoka (2008)
  32. Matsushita, S., Hatori, K., Defect of motile activity of actin filaments directly conjugated with fluorophores, Annual Meeting of Biophysical Society of Japan, Yokohama (2007)
  33. Arii, Y., Hatori, K., Relationship between the flexibility and motile activity of actin filaments: effect of pH, Annual Meeting of Biophysical Society of Japan, Yokohama (2007)
  34. Matsui, M., Hatori, K., Slow Modulated Fluctuations in an Actin Filament as Revealed by Correlation Analysis, Annual Meeting of Biophysical Society of Japan, Yokohama (2007)
  35. Hatori, K., Kikuchi, T., Characterization of mesoscopic distortions within an actin filament in vitro, EABS & Annual Meeting of Biophysical Society of Japan, Okinawa (2006)
  36. Arii, Y., Hatori, K., Flexibility change in actin filaments induced by myosin molecules at a low ATP concentration, EABS & BSJ, Okinawa (2006)
From 1995 to 2004 in Nagaoka University of Technology
Papers
  1. A. Nemoto, M. Horie, E.I. Imai, H. Honda, K. Hatori, K. Matsuno, Enantiomeric excess of amino acids in hydrothermal environments, Orig. Life Evol. Biosph. 35 (2005) 167-174. doi:10.1007/s11084-005-0638-y.
  2. R. Furuuchi, E. Imai, H. Honda, K. Hatori, K. Matsuno, Evolving lipid vesicles in prebiotic hydrothermal environments, Orig. Life Evol. Biosph. 35 (2005) 333-343. doi:10.1007/s11084-005-2039-7.
  3. T. Kawaguchi, H. Honda, K. Hatori, E. Imai, K. Matsuno, Fourier's law of heat transfer and its implication to cell motility, BioSystems 81 (2005) 19-24. doi:10.1016/j.biosystems.2005.01.003.
  4. K. Ozawa, A. Nemoto, E. Imai, H. Honda, K. Hatori, K. Matsuno, Phosphorylation of nucleotide molecules in hydrothermal environments, Orig. Life Evol. Biosph. 34 (2004) 465-471. doi:10.1023/B:ORIG.0000043121.65714.05.
  5. K. Hatori, T. Tamura, K. Kawano, M. Tamura, H. Honda, Significance of kinetic degrees of freedom in operation of the actomyosin motor, BioSystems 78 (2004) 149-153. doi:10.1016/j.biosystems.2004.09.001.
  6. K. Hatori, Y. Okeno, H. Honda, K. Shimada, K. Matsuno, Enhancing the staggered fluctuations of an actin filament sliding on Chara myosin, Biophys. Chem. 109 (2004) 345-350. doi:10.1016/j.bpc.2003.12.007.
  7. K. Hatori, J. Sakamaki, H. Honda, K. Shimada, K. Matsuno, Transition from contractile to protractile distortions occurring along an actin filament sliding on myosin molecules, Biophys. Chem. 107 (2004) 283-288. doi:10.1016/j.bpc.2003.09.011.
  8. S. Yokoyama, A. Koyama, A. Nemoto, H. Honda, E. Imai, K. Hatori, et al., Amplification of diverse catalytic properties of evolving molecules in a simulated hydrothermal environment, Orig. Life Evol. Biosph. 33 (2003) 589-595. doi:10.1023/A:1025741430748.
  9. J. Sakamaki, H. Honda, E. Imai, K. Hatori, K. Shimada, K. Matsuno, Enhancement of the sliding velocity of actin filaments in the presence of ATP analogue: AMP-PNP, Biophys. Chem. 105 (2003) 59-66. doi:10.1016/S0301-4622(03)00136-4.
  10. H. Honda, K. Kikuchi, K. Hatori, E. Imai, K. Shimada, K. Matsuno, Longitudinal distortions and transversal fluctuations of an actin filament sliding on myosin molecules, J. Biol. Phys. 28 (2002) 359-365. doi:10.1023/A:1020304420132.
  11. H. Tsukahara, E. Imai, H. Honda, K. Hatori, K. Matsuno, Prebiotic oligomerization on or inside lipid vesicles in hydrothermal environments, Orig. Life Evol. Biosph. 32 (2002) 13-21. doi:10.1023/A:1013962328048.
  12. Y. Ogata, E. Imai, H. Honda, K. Hatori, K. Matsuno, Hydrothermal circulation of seawater through hot vents and contribution of interface chemistry to prebiotic synthesis, Orig. Life Evol. Biosph. 30 (2000) 527-537. doi:10.1023/A:1026543825011.
  13. H. Ogasawara, A. Yoshida, E. Imai, H. Honda, K. Hatori, K. Matsuno, Synthesizing oligomers from monomeric nucleotides in simulated hydrothermal environments, Orig. Life Evol. Biosph. 30 (2000) 519-526. doi:10.1023/A:1026539708173.
  14. E. Imai, H. Honda, K. Hatori, A. Brack, K. Matsuno, Elongation of oligopeptides in a simulated submarine hydrothermal system, Science 283 (1999) 831-833. doi:10.1126/science.283.5403.831.
  15. K. Hatori, H. Honda, K. Shimada, K. Matsuno, Onset of the sliding movement of an actin filament on myosin molecules: From isotropic to anisotropic fluctuations, Biophys. Chem. 82 (1999) 29-33.
  16. H. Honda, K. Hatori, Y. Igarashi, K. Shimada, K. Matsuno, Contractile and protractile coordination within an actin filament sliding on myosin molecules, Biophys. Chem. 80 (1999) 137-141.
  17. E. Imai, H. Honda, K. Hatori, K. Matsuno, Autocatalytic synthesis of oligoglycine in a simulated submarine hydrothermal system, Orig. Life Evol. Biosph. 29 (1999) 249-259.
  18. K. Hatori, H. Honda, K. Shimada, K. Matsuno, Staggered movement of an actin filament sliding on myosin molecules in the presence of ATP, Biophys. Chem. 70 (1998) 241-245. doi:10.1016/S0301-4622(97)00129-4.
  19. K. Hatori, H. Honda, K. Shimada, K. Matsuno, Propagation of a signal coordinating force generation along an actin filament in actomyosin complexes, Biophys. Chem. 75 (1998) 81-85.
  20. H. Honda, N. Tagami, K. Hatori, K. Matsuno, Regulated crosslinked actin filaments and the decoupling between their ATPase activity and sliding motility, J. Biochem. 121 (1997) 47-49. doi:10.1093/oxfordjournals.jbchem.a021567.
  21. K. Hatori, H. Honda, K. Matsuno, ATP-dependent fluctuations of single actin filaments in vitro, Biophys. Chem. 58 (1996) 267-272. doi:10.1016/0301-4622(95)00100-X.
  22. K. Hatori, H. Honda, K. Matsuno, Communicative interaction of myosins along an actin filament in the presence of ATP, Biophys. Chem. 60 (1996) 149-152.
  23. H. Honda, Y. Kitano, K. Hatori, K. Matsuno, Dual role of tropomyosin on chemically modified actin filaments from skeletal muscle, FEBS Lett. 383 (1996) 55-58.
  24. K. Hatori, H. Honda, K. Matsuno, ATP hydrolysis and sliding movement of actomyosin complex in the presence of ethanol, J. Biochem. 117 (1995) 264-266. doi:10.1093/jb/117.2.264.
  25. H. Honda, T. Tamura, K. Hatori, M. Koichiro, Decorating actin filaments with troponin T-I complexes and acceleration of their sliding movement on myosin molecules, Biochim. Biophys. Acta (BBA)/Protein Struct. Mol. 1251 (1995) 43-47. doi:10.1016/0167-4838(95)00054-X.
  26. H. Honda, S. Nagao, K. Hatori, K. Matsuno, Slow and macroscopic modulation of thermal fluctuations in myofibrils, Biophys. Chem. 54 (1995) 61-66.

Return to Japanese page